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1

The RNA/Protein Symmetry Hypothesis: Experimental Support for Reverse Translation of Primitive Proteins

MASAYUKI NASHIMOTO

Journal:

Journal of Theoretical Biology

Year:

2001

Language:

english

File:

PDF, 351 KB

english, 2001

2

Functional analyses for tRNase Z variants: An aspartate and a histidine in the active site are essential for the catalytic activity

Reyad A. Elbarbary, Hiroaki Takaku, Masayuki Nashimoto

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2008

Language:

english

File:

PDF, 1.86 MB

english, 2008

3

Correct folding of a ribozyme induced by nonspecific macromolecules

Masayuki Nashimoto

Journal:

Year:

2000

Language:

english

File:

PDF, 670 KB

english, 2000

4

Escherichia coli tRNase Z can shut down growth probably by removing amino acids from aminoacyl-tRNAs

Hiroaki Takaku, Masayuki Nashimoto

Journal:

Year:

2008

Language:

english

File:

PDF, 557 KB

english, 2008

5

Bone morphogenetic protein-2 enhances Wnt/β-catenin signaling-induced osteoprotegerin expression

Mari M. Sato, Aiko Nakashima, Masayuki Nashimoto, Yasutaka Yawaka, Masato Tamura

Journal:

Year:

2009

Language:

english

File:

PDF, 314 KB

english, 2009

6

Isolation of a Gram-positive poly(3-hydroxybutyrate) (PHB)-degrading bacterium from compost, and cloning and characterization of a gene encoding PHB depolymerase of Bacillus megaterium N-18-25-9

Hiroaki Takaku, Ayumi Kimoto, Shoko Kodaira, Masayuki Nashimoto, Masamichi Takagi

Journal:

FEMS Microbiology Letters

Year:

2006

Language:

english

File:

PDF, 165 KB

english, 2006

7

Regulation of the human tRNase ZS gene expression

Masayuki Takahashi, Hiroaki Takaku, Masayuki Nashimoto

Journal:

Year:

2008

Language:

english

File:

PDF, 820 KB

english, 2008

8

Human cytosolic tRNase ZL can downregulate gene expression through miRNA

Reyad A. Elbarbary, Hiroaki Takaku, Naoto Uchiumi, Hiroko Tamiya, Mayumi Abe, Hiroshi Nishida, Masayuki Nashimoto

Journal:

Year:

2009

Language:

english

File:

PDF, 454 KB

english, 2009

9

Selection of cleavage site by mammalian tRNA 3′ processing endoribonuclease

Masayuki Nashimoto, Masato Tamura, Roger L Kaspar

Journal:

Journal of Molecular Biology

Year:

1999

Language:

english

File:

PDF, 394 KB

english, 1999

10

The inhibitory effect of the autoantigen La on in vitro 3′ processing of mammalian precursor tRNAs

Masayuki Nashimoto, Chikako Nashimoto, Masato Tamura, Roger L Kaspar, Kozo Ochi

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 268 KB

english, 2001

11

A novel spermidine-dependent endoribonuclease activity caused by RNA-protein complex in mouse FM3A cell extracts

Masayuki Nashimoto, Ryo Kominami, Shinzo Nishi, Yukio Mishima

Journal:

Biochemical and Biophysical Research Communications

Year:

1991

Language:

english

File:

PDF, 1004 KB

english, 1991

12

Transfer RNA lacking its 3′ terminos is required for spermidine-dependent ribonuclease 65 activity in mouse FM3A cell extracts

Masayuki Nashimoto, Masaharu Sakai, Shinzo Nishi

Journal:

Biochemical and Biophysical Research Communications

Year:

1991

Language:

english

File:

PDF, 771 KB

english, 1991

13

Substrate recognition ability differs among various prokaryotic tRNase Zs

Asako Minagawa, Hiroaki Takaku, Hirotaka S. Shibata, Ryohei Ishii, Masamichi Takagi, Shigeyuki Yokoyama, Masayuki Nashimoto

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 912 KB

english, 2006

14

Inhibition of vascular endothelial growth factor expression by TRUE gene silencing

Reyad A. Elbarbary, Hiroaki Takaku, Masato Tamura, Masayuki Nashimoto

Journal:

Biochemical and Biophysical Research Communications

Year:

2009

Language:

english

File:

PDF, 322 KB

english, 2009

15

Bone morphogenetic protein-2 down-regulates miR-206 expression by blocking its maturation process

Mari M. Sato, Masayuki Nashimoto, Takenobu Katagiri, Yasutaka Yawaka, Masato Tamura

Journal:

Biochemical and Biophysical Research Communications

Year:

2009

Language:

english

File:

PDF, 386 KB

english, 2009

16

Expanding the utility of heptamer-type sgRNA for TRUE gene silencing

Takako Sano, Masayuki Takahashi, Tadasuke Nozaki, Yoshiaki Takahashi, Masato Tamura, Masayuki Nashimoto

Journal:

Biochemical and Biophysical Research Communications

Year:

2011

Language:

english

File:

PDF, 647 KB

english, 2011

17

Regulation of CXCL12 expression by canonical Wnt signaling in bone marrow stromal cells

Masato Tamura, Mari M. Sato, Masayuki Nashimoto

Journal:

The International Journal of Biochemistry & Cell Biology

Year:

2011

Language:

english

File:

PDF, 711 KB

english, 2011

18

The missense mutations in the candidate prostate cancer gene ELAC2 do not alter enzymatic properties of its product

Asako Minagawa, Hiroaki Takaku, Masamichi Takagi, Masayuki Nashimoto

Journal:

Year:

2005

Language:

english

File:

PDF, 160 KB

english, 2005

19

The Flexible Arm of tRNase Z Is Not Essential for Pre-tRNA Binding but Affects Cleavage Site Selection

Asako Minagawa, Ryohei Ishii, Hiroaki Takaku, Shigeyuki Yokoyama, Masayuki Nashimoto

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.34 MB

english, 2008

20

Anomalous RNA substrates for mammalian tRNA 3′ processing endoribonuclease

Masayuki Nashimoto

Journal:

Year:

2000

Language:

english

File:

PDF, 537 KB

english, 2000

21

A naked RNA heptamer targeting the human Bcl-2 mRNA induces apoptosis of HL60 leukemia cells

Masayuki Takahashi, Reyad A. Elbarbary, Aiko Nakashima, Mayumi Abe, Norihiro Watanabe, Miwako Narita, Masuhiro Takahashi, Masato Tamura, Tetsuo Yoshida, Masayuki Nashimoto

Journal:

Year:

2013

Language:

english

File:

PDF, 916 KB

english, 2013

22

Microbial communities in the garbage composting with rice hull as an amendment revealed by culture-dependent and -independent approaches

Hiroaki Takaku, Shoko Kodaira, Ayumi Kimoto, Masayuki Nashimoto, Masamichi Takagi

Journal:

Journal of Bioscience and Bioengineering

Year:

2006

Language:

english

File:

PDF, 1.51 MB

english, 2006

23

Cloning, sequence and expression of the argG gene from Streptomyces lavendulae

Hiroshi, Ogawara, Hiromi, Kasama, Kouji, Nashimoto, Masayuki, Ohtsubo, Kyoichiro, Higashi, Hiroaki, Urabe

Journal:

Year:

1993

Language:

english

File:

PDF, 717 KB

english, 1993

24

TRUE Gene Silencing : Unique Gene Silencing by the tRNA Maturase tRNase ZL under the Direction of Small-guide RNA

Nakashima, Aiko, Nashimoto, Masayuki, Tamura, Masato

Journal:

Journal of Oral Biosciences

Year:

2007

Language:

english

File:

PDF, 403 KB

english, 2007

25

Induction of apoptosis of leukemic cells by TRUE gene silencing using small guide RNAs targeting the WT1 mRNA

Watanabe, Norihiro, Narita, Miwako, Yamahira, Akie, Taniguchi, Tomoyo, Furukawa, Tatsuo, Yoshida, Tetsuo, Miyazawa, Tatsuya, Nashimoto, Masayuki, Takahashi, Masuhiro

Journal:

Leukemia Research

Year:

2013

Language:

english

File:

PDF, 834 KB

english, 2013

26

Unstructured RNA Is a Substrate for tRNase Z †

Shibata, Hirotaka S., Minagawa, Asako, Takaku, Hiroaki, Takagi, Masamichi, Nashimoto, Masayuki

Journal:

Year:

2006

Language:

english

File:

PDF, 378 KB

english, 2006

27

Minimum Requirements for Substrates of Mammalian tRNA 3‘ Processing Endoribonuclease †

Nashimoto, Masayuki, Tamura, Masato, Kaspar, Roger L.

Journal:

Year:

1999

Language:

english

File:

PDF, 396 KB

english, 1999

28

EFFECTIVE SUPPRESSION OF HIV-1 GENE EXPRESSION BY A MAMMALIAN tRNA 3′ PROCESSING ENDORIBONUCLEASE AND EXTERNAL GUIDE SEQUENCE OLIGOZYMES

Kitano, Michiko, Barnor, Jaco S., Miyano-Kurosaki, Naoko, Endo, Yumihiko, Yukita, Masakazu, Takeuchi, Hiroaki, Tamura, Yutaka, Takai, Kazuyuki, Nashimoto, Masayuki, Takaku, Hiroshi

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2001

Language:

english

File:

PDF, 128 KB

english, 2001

29

3' truncated tRNA Arg is essential for in vitro specific cleavage of partially synthesized mouse 18S rRNA

Nashimoto, Masayuki

Journal:

Nucleic Acids Research

Year:

1993

Language:

english

File:

PDF, 3.23 MB

english, 1993

30

Characterization of the spermidine-dependent, sequence-specific endoribonuclease that rquires transfer RNA for its activity

Nashimoto, Masayuki

Journal:

Nucleic Acids Research

Year:

1992

Language:

english

File:

PDF, 3.54 MB

english, 1992

31

Conversion of mammalian tRNA 3′ processing endoriubonuclease to four-base-recognizing RNA cutters

Nashimoto, Masayuki

Journal:

Nucleic Acids Research

Year:

1995

Language:

english

File:

PDF, 1.76 MB

english, 1995

32

Site-Directed Mutagenesis of the Serotonin 5-Hydroxytryptamine2C Receptor: Identification of Amino Acids Responsible for Sarpogrelate Binding

Muntasir, Habib Abul, Takahashi, Jyuniti, Rashid, Mamunur, Ahmed, Maruf, Komiyama, Tadazumi, Hossain, Murad, Kawakami, Jun, Nashimoto, Masayuki, Nagatomo, Takafumi

Journal:

Biological & Pharmaceutical Bulletin

Year:

2006

Language:

english

File:

PDF, 240 KB

english, 2006

33

Involvement of an intracellular vesicular transport process in naked-sgRNA-mediated TRUE gene silencing

Tamura, Masato, Kawano, Mitsuoki, Sato, Mari, Nashimoto, Masayuki

Journal:

Molecular Medicine Reports

Year:

2015

Language:

english

File:

PDF, 371 KB

english, 2015

34

The Y4-RNA fragment, a potential diagnostic marker, exists in saliva

Ishikawa, Tatsuya, Haino, Arisa, Seki, Mineaki, Terada, Hiroshi, Nashimoto, Masayuki

Journal:

Non-coding RNA Research

Year:

2017

Language:

english

File:

PDF, 1.55 MB

english, 2017

35

TRUE Gene Silencing: Screening of a Heptamer-type Small Guide RNA Library for Potential Cancer Therapeutic Agents

Haino, Arisa, Ishikawa, Tatsuya, Seki, Mineaki, Nashimoto, Masayuki

Journal:

Journal of Visualized Experiments

Year:

2016

Language:

english

File:

PDF, 281 KB

english, 2016

36

10.1271/kagakutoseibutsu.49.150

TAKAKU, Hiroaki, NASHIMOTO, Masayuki

Journal:

KAGAKU TO SEIBUTSU

Year:

2011

File:

PDF, 408 KB

2011

37

The 3′ end CCA of mature tRNA is an antideterminant for eukaryotic 3′-tRNase

MOHAN, AMULYA, WHYTE, STACEY, WANG, XUDONG, NASHIMOTO, MASAYUKI, LEVINGER, LOUIS

Journal:

Year:

1999

Language:

english

File:

PDF, 33 KB

english, 1999

38

Potential physiological roles of the 31/32-nucleotide Y4-RNA fragment in human plasma

Ninomiya, Sho, Ishikawa, Tatsuya, Takahashi, Masayuki, Seki, Mineaki, Nashimoto, Masayuki

Journal:

Non-coding RNA Research

Year:

2019

File:

PDF, 729 KB

2019

39

The 31-nucleotide Y4-RNA fragment in plasma is a potential novel biomarker

Ishikawa, Tatsuya, Haino, Arisa, Seki, Mineaki, Kurihara, Taro, Hirose, Takayuki, Imai, Yosuke, Ishiguro, Takuro, Chou, Takaaki, Toshima, Muneatsu, Terada, Hiroshi, Nashimoto, Masayuki

Journal:

Non-coding RNA Research

Year:

2019

File:

PDF, 674 KB

2019

40

Mastication Affects Transcriptomes of Mouse Microglia

SEKI, MINEAKI, HAINO, ARISA, ISHIKAWA, TATSUYA, INAGAWA, HIROYUKI, SOMA, GEN-ICHIRO, TERADA, HIROSHI, NASHIMOTO, MASAYUKI

Journal:

Anticancer research

Year:

2020

File:

PDF, 5.46 MB

2020

41

Heptamer-type small guide RNA that can shift macrophages toward the M1 state

Ishikawa, Tatsuya, Haino, Arisa, Ichiyanagi, Takashi, Takahashi, Masayuki, Seki, Mineaki, Nashimoto, Masayuki

Journal:

Blood Cells, Molecules, and Diseases

Year:

2021

File:

PDF, 1.98 MB

2021